DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17658 and Mss51

DIOPT Version :10

Sequence 1:NP_611845.2 Gene:CG17658 / 37793 FlyBaseID:FBgn0034924 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_001099495.1 Gene:Mss51 / 289904 RGDID:1309408 Length:467 Species:Rattus norvegicus


Alignment Length:375 Identity:79/375 - (21%)
Similarity:133/375 - (35%) Gaps:93/375 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 STEALEDCEGCAGVAFCSAAHQRLVRGYHTPEDCQTLALIATPFRQLNCLVNIKDF-YRSCP--- 213
            |.:.|..|:.|..|.:|.|..||.....|. :.|..|.|:|.. |.:..|:...|| ..|.|   
  Rat   116 SCKVLRHCKRCRNVYYCDAECQRSDWPAHR-KVCGELRLVAVD-RVMEWLLVTGDFVLPSGPWPW 178

  Fly   214 LKESNLIKAFTEATDIRISDTPWTDLESYQLFATCSSFSGIASLCLALSHISWV------PDPNK 272
            |.|           :|:..|| |..:...||.:|.::..|..::.:.     |.      |||: 
  Rat   179 LPE-----------EIQNWDT-WFSMRGLQLESTLNALLGSHAMTML-----WASLGRPRPDPD- 225

  Fly   273 AVIVYVAGATEDTLRYFEDMHLRFLFLQYPSIRNL----------ELHFIGRT--------VGRI 319
                .:.|:.:   |...|:..|.|.|.. .||.|          .||.:|.:        .|..
  Rat   226 ----VLHGSLK---RLMTDVLSRPLTLGL-GIRTLAIDVGKTGGSTLHVVGASHVETFLIRSGDY 282

  Fly   320 DQVDIKFSDR-SFEQTVVKCFYPLSFSQYSCILNVDPTLILI-----MQPDFFGVGKVTQRISRY 378
            |::...|.:. .|...:|.........|.|..|.::|..:.:     :..||:.....|..::. 
  Rat   283 DELGYMFPENLGFRVIMVGVDVSADLLQSSSSLPLEPGTVQLSGHRALYHDFWEEQIETGNLAH- 346

  Fly   379 MKRKVP---------------LENEWKPCLSSVIRSFGVPICYTSISRAQAISDFAAITLSAEKS 428
                 |               |...|.|.| .::|.:.:|...|..|: |.:.....:.::.:..
  Rat   347 -----PDLVAAFHPGFHASPGLMEAWLPTL-LLLRDYEIPTLITVYSQ-QELEASLQVLVNLDTH 404

  Fly   429 KIAIERAYNIMGNPYREILPLHNPAPEDTERIVYANNYLEVIFTSKKKCQ 478
            .||..      .||:..:.| .....:..::.||::.|. ::|.....||
  Rat   405 IIACG------ANPFASLKP-EQVYSKPNKQPVYSSAYY-IVFRGCSSCQ 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17658NP_611845.2 zf-MYND 53..87 CDD:480929
Mss51NP_001099495.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
zf-MYND 104..148 CDD:460312 10/32 (31%)
MSS51_C 242..422 CDD:466330 35/195 (18%)
Blue background indicates that the domain is not in the aligned region.

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