DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17658 and mss51

DIOPT Version :10

Sequence 1:NP_611845.2 Gene:CG17658 / 37793 FlyBaseID:FBgn0034924 Length:478 Species:Drosophila melanogaster
Sequence 2:XP_002940645.2 Gene:mss51 / 100496751 XenbaseID:XB-GENE-994706 Length:447 Species:Xenopus tropicalis


Alignment Length:336 Identity:70/336 - (20%)
Similarity:112/336 - (33%) Gaps:105/336 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 ALEDCEGCAGVAFCSAAHQRLVRGYHTPEDCQTLALIATPFRQLNCLVNIKDFYRSCPLKESNLI 220
            ::..|:.|..|.:|.:..||....:| .:.|:.|.|.|     ::.||....|....|......|
 Frog   107 SMRRCKRCQNVYYCGSECQRENWPFH-KKFCRKLKLAA-----IDRLVEWLIFTGDIPFPTKPWI 165

  Fly   221 KAFTEATDIRISDTPWTDLESYQLFATCSSFSGIASLCLALSHISWV------PDPN-------- 271
            |.|:|..:       |.|..|.|........|.:||..:|   |.|.      |:.|        
 Frog   166 KPFSELKN-------WEDWFSMQEGLEEKLDSIMASRYMA---ILWSNAGKPRPEDNELRESIKR 220

  Fly   272 -------------------------KAVIVYVAGATEDTLRYFEDMHLRF-----LFLQYPSIRN 306
                                     |.:.|:|.||:     :.|.:::|.     |...:|..:.
 Frog   221 LMTDFFTRPMTIGFAINAFSVDPYVKPITVHVIGAS-----HIETLNIRATDYDELAKMFPGNQG 280

  Fly   307 LELHFIGRTV----------------GRIDQVDIKFSDRSFEQTVVKC-----------FYPLSF 344
            :|:..:|..|                ||:.....|.....|.:||::.           |:|...
 Frog   281 IEVVMVGPEVVDGPVMRPPLVAYGPRGRVYVSGYKGLYHVFWETVIESQQAARPDLVVGFHPGFH 345

  Fly   345 SQYSCILNVDPTLILIMQ---PDFFGVGKVTQRISRYMKRKVPLENEWKPCLSSVIRSFGVPICY 406
            :.........|||:|:..   |..|     |......||..:.:..|    |.:.:.||| |..:
 Frog   346 ASQGLAEGWLPTLLLLRDYSIPSMF-----TMYSEHEMKYSLQILAE----LETQVLSFG-PFPF 400

  Fly   407 TSISRAQAISD 417
            :|:...|..||
 Frog   401 SSLKPEQVQSD 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17658NP_611845.2 zf-MYND 53..87 CDD:480929
mss51XP_002940645.2 zf-MYND 92..136 CDD:460312 7/29 (24%)
MSS51_C 229..407 CDD:466330 36/192 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.