Sequence 1: | NP_611844.3 | Gene: | Upf3 / 37792 | FlyBaseID: | FBgn0034923 | Length: | 492 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001117406.1 | Gene: | UPF3 / 840295 | AraportID: | AT1G33980 | Length: | 484 | Species: | Arabidopsis thaliana |
Alignment Length: | 527 | Identity: | 131/527 - (24%) |
---|---|---|---|
Similarity: | 210/527 - (39%) | Gaps: | 134/527 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 KIVMRHLPPTMTEAQFLDQVGPLPENDSYYYC-----KADWSLGQEATCRAYIDMSSKDIGEVVQ 90
Fly 91 FRDRFDGYVFVDHKGVEYMAIVEYAPFQCFLKNKARNDDSKVNTIESEPHYQEFIKRLAQEREEA 155
Fly 156 SRMGDVKIDFNFERRTEEKVKS-------TPLLQYLANKK----------EKRREEAR------- 196
Fly 197 -------RRNEEKRK--QREEQKLLRLAAQSDASKLKEAEGGGGGGDTKKPAKKDVKDPQSSGSQ 252
Fly 253 --ANDAKA----SRSKRRTERDQRRREEHEQRKLVKRDKKKD--DGQGKQDKQDKQDKGKPSSGK 309
Fly 310 QNKNSKSMDI-------VILKKANKPESNESLDVPSTSNAAEASKEKPATENTETPEAAVKVFTP 367
Fly 368 AARGGRKEKRTGADKQPAGSAHETAEEAIKAAQFRASEERRIRNKDRPSIAIYQPKARIRASDEL 432
Fly 433 PQGAGGKDG-------SDGEASVVE-------EKTSKR--NKRPNRRNKPKPKEVKECELETRRF 481
Fly 482 SKSSESS 488 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf3 | NP_611844.3 | Smg4_UPF3 | 27..186 | CDD:281466 | 51/166 (31%) |
UPF3 | NP_001117406.1 | Smg4_UPF3 | 6..170 | CDD:281466 | 52/169 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I3178 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1295 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 93 | 1.000 | Inparanoid score | I2249 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002677 | |
OrthoInspector | 1 | 1.000 | - | - | oto4141 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104140 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13112 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.910 |