Sequence 1: | NP_611844.3 | Gene: | Upf3 / 37792 | FlyBaseID: | FBgn0034923 | Length: | 492 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_957248.1 | Gene: | upf3b / 393929 | ZFINID: | ZDB-GENE-040426-1630 | Length: | 467 | Species: | Danio rerio |
Alignment Length: | 521 | Identity: | 154/521 - (29%) |
---|---|---|---|
Similarity: | 248/521 - (47%) | Gaps: | 105/521 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAETFAEEKPKEK-------SKASRRKDKKDKTNQIVKIVMRHLPPTMTEAQFLDQVGPLPENDS 58
Fly 59 YYYCKADWSLGQEATCRAYIDMSSKDIGEVVQFRDRFDGYVFVDHKGVEYMAIVEYAPFQCFLKN 123
Fly 124 KARNDDSKVNTIESEPHYQEFIKRLAQEREEASRMGDVKIDFNFERRTEE--KVKSTPLLQYLAN 186
Fly 187 K---KEKRREEARRRNEEKRKQREEQKLLRLAAQSDASKLKEAEGGGGGGDTKKPAKKDVKDPQS 248
Fly 249 SGSQANDAKASRSKRRTERDQRRREEHEQRKLVKRDKKKDDGQGK--QDKQDKQDK-----GKPS 306
Fly 307 SG--KQNKNSKSMDIVILKKANKPESNESLDVPSTSNAAEASKEKPATENTETPEAAVKVFTPAA 369
Fly 370 RGGRKEKRTGADKQPAGSAHETAEEAIKAAQFRASEER--------------------------- 407
Fly 408 ---RIRNKDRPSIAIYQPKARIRASDELPQGAGGKDGSDGEASVVEEKTSKRNKRPNRRNKPKPK 469
Fly 470 E 470 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf3 | NP_611844.3 | Smg4_UPF3 | 27..186 | CDD:281466 | 62/160 (39%) |
upf3b | NP_957248.1 | Smg4_UPF3 | 35..194 | CDD:281466 | 63/161 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170579288 | |
Domainoid | 1 | 1.000 | 125 | 1.000 | Domainoid score | I5417 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1295 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 194 | 1.000 | Inparanoid score | I3821 |
OMA | 1 | 1.010 | - | - | QHG46948 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002677 | |
OrthoInspector | 1 | 1.000 | - | - | otm24511 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104140 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13112 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1758 |
SonicParanoid | 1 | 1.000 | - | - | X2445 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.790 |