Sequence 1: | NP_611844.3 | Gene: | Upf3 / 37792 | FlyBaseID: | FBgn0034923 | Length: | 492 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593705.1 | Gene: | upf3 / 2542908 | PomBaseID: | SPAC13G7.03 | Length: | 278 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 296 | Identity: | 83/296 - (28%) |
---|---|---|---|
Similarity: | 137/296 - (46%) | Gaps: | 45/296 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 KIVMRHLPPTMTEAQFLDQVGP-LPENDSYYYCKADWSLGQEATCRAYIDMSSKDIGEVVQFRDR 94
Fly 95 FDGYVFVDHKGVEYMAIVEYAPFQCFLKNKARNDDSKVNTIESEPHYQEFIKRLAQEREEASRMG 159
Fly 160 DVKIDFNFERRTEEKVK-STPLLQYLANKKEKRREEARRRNEEKRKQREEQKLLRLAAQSDASKL 223
Fly 224 KEAEGGGGGGDTKKPAKKDVKDP-QSSGSQANDAKASRSKRRTERDQRRREEHEQRKLVKRDKK- 286
Fly 287 ----KDDGQGKQDKQDKQDKGKPSSGKQNKNSKSMD 318 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf3 | NP_611844.3 | Smg4_UPF3 | 27..186 | CDD:281466 | 46/156 (29%) |
upf3 | NP_593705.1 | Smg4_UPF3 | 13..160 | CDD:281466 | 47/158 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 68 | 1.000 | Domainoid score | I2719 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1295 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 93 | 1.000 | Inparanoid score | I1721 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002677 | |
OrthoInspector | 1 | 1.000 | - | - | oto101786 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104140 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13112 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1758 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.890 |