DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP1 and Dcp1a

DIOPT Version :10

Sequence 1:NP_611842.1 Gene:DCP1 / 37790 FlyBaseID:FBgn0034921 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_598522.4 Gene:Dcp1a / 75901 MGIID:1923151 Length:582 Species:Mus musculus


Alignment Length:368 Identity:118/368 - (32%)
Similarity:166/368 - (45%) Gaps:68/368 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNT 73
            |:|||:|:.|||...|.|.:..||.|||....|:|||||:||..|:|.|:|.|:|...|.||||.
Mouse    11 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNM 75

  Fly    74 TSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKSKDQGTNGQAQRH 138
            .:.|||:...||.|...|||||||....|...|||:..:|.||:.|:..:::.:.:.:. ||.|.
Mouse    76 HNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQ-QAARD 139

  Fly   139 VSAPQQPKQDSSQ-PASIFNMLTKAQKDYNAQVSGG--------QPKTPSAENVTAGNVLKFFES 194
            ..:|.|....|.| |..|..||::|:.:|.....||        ||.| ...|:.:...|:...|
Mouse   140 KQSPSQANGCSDQRPIDILEMLSRAKDEYERNQMGGSNISSPGLQPST-QLSNLGSTETLEETPS 203

  Fly   195 AKQATAESLFHR---VQPLSVDQLEKQQRAA--TPGED---LLPPAGRDNHESRLS-PFQKM--- 247
            ..|..:....|:   |:.|....|.|:|..|  ...||   ||..|.:....|.|. ||::.   
Mouse   204 GSQDKSAPSGHKHLTVEELFGTSLPKEQPTAMGLESEDTDKLLGDASQKEPSSFLPFPFEQSGGA 268

  Fly   248 -QQLNIQLLSDLKIGKSYATAQ----SPT-VAPSSSALMANDDAGKCLRRLLAGDKP-------- 298
             |..|:.:.|     .::.|.|    :|. :.|:|.|              .:|||.        
Mouse   269 PQSENLGIHS-----AAHHTVQPEVSTPVLITPASIA--------------QSGDKHPPSYTLPL 314

  Fly   299 GPALMPPTMFDAPNNGNPE-PQQ----------PQQPQQPLLN 330
            .|.|.|....:||....|. |:.          |:| :.||||
Mouse   315 SPVLSPTLPAEAPTTQVPHLPRNSTMIQAVKTTPRQ-KSPLLN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP1NP_611842.1 Dcp1 4..124 CDD:197362 55/114 (48%)
mRNA_decap_C 328..362 CDD:465253 3/3 (100%)
Dcp1aNP_598522.4 Dcp1 6..126 CDD:197362 55/114 (48%)
Atrophin-1 <258..>531 CDD:460830 28/119 (24%)
mRNA_decap_C 539..581 CDD:465253
Blue background indicates that the domain is not in the aligned region.

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