DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP1 and Dcp1a

DIOPT Version :9

Sequence 1:NP_001163282.1 Gene:DCP1 / 37790 FlyBaseID:FBgn0034921 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001178760.1 Gene:Dcp1a / 361109 RGDID:1561298 Length:601 Species:Rattus norvegicus


Alignment Length:389 Identity:123/389 - (31%)
Similarity:169/389 - (43%) Gaps:74/389 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNT 73
            |:|||:|:.|||...|.|.:..||.|||....|:|||||:||..|:|.|:|.|:|...|.||||.
  Rat    31 MSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNM 95

  Fly    74 TSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKSKDQGTNGQAQRH 138
            .:.|||:...||.|...|||||||....|...|||:..:|.||:.|:..:::.:.:... ||.|.
  Rat    96 HNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAKLMADVVEEEARRAQ-QAARD 159

  Fly   139 VSAPQQPKQDSSQ-PASIFNMLTKAQKDYNAQVSGG--------QP--------KTPSAENVTAG 186
            ..:|.|....|.| |..|..||::|:.:|.....||        ||        .|.:.|...:|
  Rat   160 KQSPSQANGCSDQRPIDILEMLSRAKDEYERNQMGGSNISSPGLQPSSQLSNLGSTETLEETPSG 224

  Fly   187 NVLKFFESA-KQATAESLFHRVQPLSVDQLEKQQRA--ATPGED---LLPPAGRDNHESRLS-PF 244
            :..|...|. |..|.|.||.       ..|.|:|.|  ....||   ||..|.:....|.|. ||
  Rat   225 SQDKSAPSGHKHLTVEELFG-------TSLPKEQPAPMGLESEDTDKLLGDAPQKEPSSFLPFPF 282

  Fly   245 QKM----QQLNIQLLSDLKIGKSYATAQSPTVAP--SSSALMANDDAGKCLRRLLAGDKP----- 298
            ::.    |..|:.:.|     .::.|.|....||  .:.|.:|.           :|||.     
  Rat   283 EQSGGAPQAENLGVHS-----VTHHTVQPEVSAPVLITPASIAQ-----------SGDKHPPSYT 331

  Fly   299 ---GPALMPPTMFDAPNNGNPE-PQQ----------PQQPQQPLLNSTQFVQAFTYLIQNDKEF 348
               .|.|.|....:||....|. |:.          |:| :.||||......:.:.||.:...|
  Rat   332 LPLSPVLSPTLPAEAPTTQVPHLPRNSTMMQAVRTTPRQ-KSPLLNQPVPELSHSSLIASQSPF 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP1NP_001163282.1 Dcp1 4..124 CDD:197362 55/114 (48%)
mRNA_decap_C 328..362 CDD:293346 6/21 (29%)
Dcp1aNP_001178760.1 Dcp1 26..146 CDD:197362 55/114 (48%)
mRNA_decap_C 558..600 CDD:293346
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342308
Domainoid 1 1.000 122 1.000 Domainoid score I5514
eggNOG 1 0.900 - - E1_KOG2868
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509316at2759
OrthoFinder 1 1.000 - - FOG0002778
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2627
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.810

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