DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP1 and dcap-1

DIOPT Version :9

Sequence 1:NP_001163282.1 Gene:DCP1 / 37790 FlyBaseID:FBgn0034921 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_500030.1 Gene:dcap-1 / 176924 WormBaseID:WBGene00021929 Length:332 Species:Caenorhabditis elegans


Alignment Length:378 Identity:93/378 - (24%)
Similarity:160/378 - (42%) Gaps:71/378 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADESITRMNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIF 66
            |...:...|||.::|||..|.:|:|.....|.|..::::.||.:::.||.||:|.|...|:.|..
 Worm     8 AAAELAAKNLAQLQKIDIAASKILDKMPFAAIYHIDAARKEWNQSNCEGTFFVYQRADRPYFSFL 72

  Fly    67 INNRLNTTSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKSKDQGT 131
            |.||.:.:.|:||:|.:..|:....|:.:..:.:.|:..||:..::..:|..|:..|:......|
 Worm    73 IANRNDPSDFIEPLTLNHILRHDGNFIYFYKDLASIQALWFHQIDDAQKIYNLLQKLVNRLKGST 137

  Fly   132 NGQAQRHVSAPQQPKQDSSQPASIFNMLTKAQKDYNAQVSGGQPKTPSAENVTAGNVLKFFESAK 196
            ..||:...:|.:.|:  :|.||........||....|      |:.|...     ::|:..:||:
 Worm   138 TEQARAAKAASEAPQ--ASVPAPTQAPAAPAQAPQMA------PQAPPKV-----DLLQLIKSAQ 189

  Fly   197 Q------ATAESLFHRVQPL---------SVDQLEKQQRAATPGEDLLPPAGRDNHESRLSPFQK 246
            .      ||.|.:...:|.|         |.|:|||         ||:..|  ..|.:.|     
 Worm   190 NPPQKSAATIEQMPPMLQKLMLKEPGAAMSADELEK---------DLIKSA--KPHRNHL----- 238

  Fly   247 MQQLNIQLLSDLKIGKSYATAQSPTVAPSSSALMANDDAGKCLRRLLAGDKPGPALMPPTMFDAP 311
                 :|..::.....|.|...:..:..|...:.::...|:.|..|.|....|..          
 Worm   239 -----LQEFTNSTSAISLAAVSTKPLHGSEGDVESDIAEGEILEPLDASFVVGSG---------- 288

  Fly   312 NNGNPEPQQPQQPQQPLLNSTQFVQAFTYLIQNDKEFANKLHKAYLNGCSNLL 364
                        .|.|:||..||:.|..:|:|.|.||.:::|:||::..:..|
 Worm   289 ------------EQTPVLNKEQFISAIAHLMQTDDEFVSQIHQAYVSALNRRL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP1NP_001163282.1 Dcp1 4..124 CDD:197362 35/119 (29%)
mRNA_decap_C 328..362 CDD:293346 13/33 (39%)
dcap-1NP_500030.1 Dcp1 20..130 CDD:197362 32/109 (29%)
mRNA_decap_C 291..330 CDD:374768 15/39 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158846
Domainoid 1 1.000 78 1.000 Domainoid score I5692
eggNOG 1 0.900 - - E1_KOG2868
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I3555
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28896
OrthoDB 1 1.010 - - D1509316at2759
OrthoFinder 1 1.000 - - FOG0002778
OrthoInspector 1 1.000 - - oto18896
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16290
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R298
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.940

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