DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP1 and dcp1b

DIOPT Version :9

Sequence 1:NP_001163282.1 Gene:DCP1 / 37790 FlyBaseID:FBgn0034921 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_002938149.2 Gene:dcp1b / 100488205 XenbaseID:XB-GENE-877165 Length:559 Species:Xenopus tropicalis


Alignment Length:534 Identity:138/534 - (25%)
Similarity:193/534 - (36%) Gaps:185/534 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNT 73
            ::|||:::.|||.:.|||.:|.||.|||:....|||||||||..|:|.|:|.|.|...|.|||:.
 Frog    15 ISLAALRRHDPYIQAIVDVASQVALYTFSHKACEWEKTDVEGTLFVYSRSASPKHGFTIMNRLSM 79

  Fly    74 TSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLLKSKDQGTNGQAQRH 138
            .:..||||..|:.|.|.|||||||.|..|.|.|||:.|||.||:.|:..|.:.:.......|...
 Frog    80 ENRTEPITKDLDFQLQDPFLLYRNARFFIYGIWFYDKEECQRIAELMKNLTQQEQLKAQQGAASG 144

  Fly   139 VSAPQQPKQDSSQPASIFNMLTKAQKDYNAQVSGGQPK--TPSAENVTAGNVLK----------- 190
            || |........:.|.|..|||||:.:|....|..:||  |.|:...|..|::|           
 Frog   145 VS-PMPLGTGDGKGADILQMLTKAKDEYTKCKSCSEPKMITSSSAIYTNPNLIKPIAVKPSESQP 208

  Fly   191 -------FFESAKQ-----------------------------ATAESLFHRVQPLSVDQLEKQ- 218
                   ..||.||                             :...||.:.....:.:.:||| 
 Frog   209 GKVRALEAVESEKQHLSLTALFGKPDKAQEQMKLHSEPGAVRHSVVRSLSYEEPGKATENVEKQL 273

  Fly   219 ----QRAATPGEDLLP----PAGRDNHE-----------------SRLSPFQK---------MQQ 249
                |:....|..|.|    |..|..|.                 :..:||..         :|.
 Frog   274 CPAIQKLMVAGSGLQPVSEVPENRPCHNGSYPPDGDILPGLFIPVTHQAPFSNQDYESGKTLLQT 338

  Fly   250 L--------NIQLLS----------DLKIGKSYATAQSPTVAPSSSALMANDDAG--KCLRRL-- 292
            |        |..::|          |..:.....:|..|.:..||..:||:....  :.|::|  
 Frog   339 LHTAPVGGPNADMVSSCAAHSLNYHDCSLPNQRTSAPMPPLPLSSQPVMASGTISPQELLKKLNL 403

  Fly   293 --------------LAGDKP--------------------------------------GPA-LMP 304
                          ||...|                                      .|| ||.
 Frog   404 VRQEQQMQSNPRPALAAKFPVVSQSVPKTSWVENIPRAEKQNLLLQQASSPQHIPASVSPALLMS 468

  Fly   305 PTMFDAPN-------NGN-----PEPQQ-------PQQPQQPL------LNSTQFVQAFTYLIQN 344
            |.:|..|:       ..|     .||..       |:.|...:      |..:|..:...:||||
 Frog   469 PMVFAQPSLQTRTNETANLSLCTKEPSNLLFPAAFPENPTNTMNSWNGVLTRSQLQETLLHLIQN 533

  Fly   345 DKEFANKLHKAYLN 358
            |..|.|.:::.||:
 Frog   534 DDSFLNTIYETYLS 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP1NP_001163282.1 Dcp1 4..124 CDD:197362 60/114 (53%)
mRNA_decap_C 328..362 CDD:293346 11/37 (30%)
dcp1bXP_002938149.2 Dcp1 15..130 CDD:197362 60/114 (53%)
mRNA_decap_C 517..551 CDD:374768 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5449
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I3967
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509316at2759
OrthoFinder 1 1.000 - - FOG0002778
OrthoInspector 1 1.000 - - otm49481
Panther 1 1.100 - - LDO PTHR16290
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R298
SonicParanoid 1 1.000 - - X2627
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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