DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCP1 and dcp1a

DIOPT Version :9

Sequence 1:NP_001163282.1 Gene:DCP1 / 37790 FlyBaseID:FBgn0034921 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_031757125.1 Gene:dcp1a / 100485468 XenbaseID:XB-GENE-997675 Length:525 Species:Xenopus tropicalis


Alignment Length:509 Identity:137/509 - (26%)
Similarity:188/509 - (36%) Gaps:166/509 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MNLAAIKKIDPYAKEIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNT 73
            |:|||:::.|||...|||.:.|||.|.|:...||||||||||..|:|.|:|.|.|...|.||||.
 Frog    11 MSLAALRQSDPYISNIVDVTGHVALYRFSPKANEWEKTDVEGTLFVYTRSASPHHGFTIMNRLNM 75

  Fly    74 TSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEECDRISGL------------------- 119
            .:.|||:...||.|...|||||||....|...|||:..:|.||:.|                   
 Frog    76 HNLVEPVNKDLEFQLHEPFLLYRNSSLAIYSIWFYDKIDCQRIAKLMTQVVQQESERAKTWKNPS 140

  Fly   120 -VNG-----------LLKSKDQGTNGQAQR------HVSAPQQPKQDS------SQPA---SIFN 157
             |||           |.|:|::...||...      :...|...|.||      |.||   ::..
 Frog   141 AVNGCTDRPIDILEMLSKAKNEYEQGQGLNDSGNGSYSEKPNYKKADSLEAPENSAPAQEKAVHK 205

  Fly   158 MLTKAQKDYNAQVSGGQPKT---PSAE-----------------------------NVTA----- 185
            .|| .::.:...|:..||..   ||.|                             |..|     
 Frog   206 HLT-VEELFGTSVTKEQPAANCYPSLEPSDRRPQLYAPASCEQPSPVVVKAACASFNAVASDFSH 269

  Fly   186 ----------------------GNVLKFFESAKQATA-ESLFHRVQ--PLSVDQLEKQQRAATPG 225
                                  .|::....|...||| |.|...:|  |..|..|..|   ..|.
 Frog   270 PACVAPTVFAQGPGQRPPSQAVANLISLSPSLGIATAPEGLISAIQSAPGQVSPLLSQ---PVPE 331

  Fly   226 EDLLPP--------------AGRD-NHESRLSPFQKMQQLNIQLLSDLKIGKSYATAQSPTV--- 272
            ..||||              :|.| .|:.:|.|  ...|:..|.||...|...:::|.....   
 Frog   332 WHLLPPLAPVSSSSVVNSSHSGADLLHKLKLIP--HTDQVQTQPLSKASIAPKFSSALGQLATPE 394

  Fly   273 ---------APSSSALMANDD------------AGKCLRRLLAG-------DKPGPA-LMPPTMF 308
                     .||:..:||...            ..|||.::::.       ...||: ||.|::|
 Frog   395 SFKGGIMKPVPSTGLVMAPLQNVLDKKECEVLPQPKCLPKVVSATPYVAQMSTVGPSVLMSPSVF 459

  Fly   309 -----DAPNNGNPEPQQPQQPQQPLLNSTQFVQAFTYLIQNDKEFANKLHKAYL 357
                 :.....:|.......|.:.:|:.:|..:...:||:||..|.|.||..||
 Frog   460 HQSVQEEKARMSPIDSALSDPSKFVLSRSQLQETLIHLIKNDSGFLNSLHDVYL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCP1NP_001163282.1 Dcp1 4..124 CDD:197362 60/145 (41%)
mRNA_decap_C 328..362 CDD:293346 12/30 (40%)
dcp1aXP_031757125.1 Dcp1 6..126 CDD:197362 57/114 (50%)
mRNA_decap_C 484..524 CDD:407010 12/30 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5449
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I3967
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509316at2759
OrthoFinder 1 1.000 - - FOG0002778
OrthoInspector 1 1.000 - - otm49481
Panther 1 1.100 - - O PTHR16290
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R298
SonicParanoid 1 1.000 - - X2627
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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