DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5597 and si:dkey-71p21.13

DIOPT Version :10

Sequence 1:NP_611841.1 Gene:CG5597 / 37789 FlyBaseID:FBgn0034920 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_001339740.3 Gene:si:dkey-71p21.13 / 799376 ZFINID:ZDB-GENE-090313-327 Length:252 Species:Danio rerio


Alignment Length:215 Identity:46/215 - (21%)
Similarity:72/215 - (33%) Gaps:68/215 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PTILDCDYEVEESPKFITVKWYRDDKSIYQWIFGTPPYAIPEFRNEIDSTYESST-----EPSKQ 100
            |.:|.|.:..:.....:::.|.|.:.|....:|    |.....:.:..:.|.|.|     |.:|.
Zfish    32 PAVLGCYFMPDPDLSSLSIVWQRMEDSRLVHVF----YDEENLQEQQSAEYHSRTSLYISELNKG 92

  Fly   101 YSSLALINPTIATTGDYKCVVQT----------------------SLNTFSSHQRVQ-------- 135
            .:||.:....:...|.|.|.|:.                      |::..||..|||        
Zfish    93 NASLRIDGVGLKDEGWYVCKVRNKKGAGKVKIKLDYGAFYSEPRLSIHANSSSVRVQYETEGFPK 157

  Fly   136 --VIDLRNYTLELSHKTIHNETQLNCTVTNVY----------PRPTIT-IISNDMDVVKREPMVY 187
              ||....:...|||   |.|. |:.|...:|          |...:| |:.|.:...|.:..|.
Zfish   158 PEVIWQDEHNQSLSH---HLEL-LDHTEVGLYLVKSSYEAQTPVVKVTFILKNHLLNQKLQKSVI 218

  Fly   188 ENEEGYFDGSAVVAAYDTDD 207
                 |..|       ||:|
Zfish   219 -----YIPG-------DTED 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5597NP_611841.1 None
si:dkey-71p21.13XP_001339740.3 Ig 24..128 CDD:472250 19/99 (19%)
Ig strand B 33..37 CDD:409353 1/3 (33%)
Ig strand C 49..53 CDD:409353 0/3 (0%)
Ig strand E 94..98 CDD:409353 2/3 (67%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 0/2 (0%)
Ig 131..>170 CDD:472250 8/38 (21%)
Ig strand B 146..150 CDD:409353 2/3 (67%)
Ig strand C 159..163 CDD:409353 2/3 (67%)

Return to query results.
Submit another query.