| Sequence 1: | NP_611841.1 | Gene: | CG5597 / 37789 | FlyBaseID: | FBgn0034920 | Length: | 260 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001096132.1 | Gene: | Skint1 / 639781 | MGIID: | 3649627 | Length: | 364 | Species: | Mus musculus |
| Alignment Length: | 142 | Identity: | 29/142 - (20%) |
|---|---|---|---|
| Similarity: | 47/142 - (33%) | Gaps: | 33/142 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 44 LDCDYEVEESPKFITVKW-----------YRDDKSIYQWIFGTPPYAIPEFRNEIDSTYESSTEP 97
Fly 98 SKQ-----YSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVIDLRNYTLELS-HKTIHNETQ 156
Fly 157 LNCTVTNVYPRP 168 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG5597 | NP_611841.1 | None | |||
| Skint1 | NP_001096132.1 | IGv domain | 27..141 | 22/109 (20%) | |
| IgV_MOG_like | 28..141 | CDD:409378 | 22/109 (20%) | ||
| FR1 | 28..51 | CDD:409378 | 2/3 (67%) | ||
| Ig strand A | 29..33 | CDD:409378 | |||
| Ig strand A' | 36..40 | CDD:409378 | |||
| Ig strand B | 43..51 | CDD:409378 | 2/3 (67%) | ||
| CDR1 | 52..60 | CDD:409378 | 0/7 (0%) | ||
| Ig strand C | 60..65 | CDD:409378 | 0/4 (0%) | ||
| FR2 | 61..65 | CDD:409378 | 0/3 (0%) | ||
| CDR2 | 66..84 | CDD:409378 | 4/32 (13%) | ||
| Ig strand C' | 70..78 | CDD:409378 | 1/7 (14%) | ||
| Ig strand C' | 79..82 | CDD:409378 | 1/2 (50%) | ||
| FR3 | 86..126 | CDD:409378 | 13/39 (33%) | ||
| Ig strand D | 93..98 | CDD:409378 | 2/4 (50%) | ||
| Ig strand E | 104..112 | CDD:409378 | 1/7 (14%) | ||
| Ig strand F | 119..127 | CDD:409378 | 4/7 (57%) | ||
| CDR3 | 127..129 | CDD:409378 | 0/2 (0%) | ||
| Ig strand G | 129..141 | CDD:409378 | 1/11 (9%) | ||
| FR4 | 130..141 | CDD:409378 | 1/10 (10%) | ||
| IGc domain | 142..228 | 6/31 (19%) | |||
| transmembrane domain 1 | 247..269 | ||||
| transmembrane domain 2 | 282..304 | ||||
| transmembrane domain 3 | 326..348 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||