DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5597 and beat-Vb

DIOPT Version :10

Sequence 1:NP_611841.1 Gene:CG5597 / 37789 FlyBaseID:FBgn0034920 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_731748.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster


Alignment Length:175 Identity:37/175 - (21%)
Similarity:75/175 - (42%) Gaps:19/175 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILAIG----LLHRDALCYPTRDESEDKIIVLQNEEMEPTILDCDYEVEESPKFITVKWYRDDKSI 68
            :|.:|    |:.|...|....|.:..:|:..::.    ..|.|.|:: ......:||||::.|..
  Fly     7 LLQLGVHMLLVVRRIQCLRVTDINVPQIVDFRDN----VTLSCSYDI-SGHTLNSVKWYKNGKEF 66

  Fly    69 YQWIFGTPPYAIPEFRNEIDSTYESSTEPSKQYSSLALINPTIATTGDYKCVV-----QTSLNTF 128
            :::...|||..|| |..|.....:...|.::....:.|....:.::|.|:|.|     ...|...
  Fly    67 FRYSPLTPPTYIP-FAVEGVQLIDDGNECNESSCRVELNLLGVKSSGVYRCEVSGDAPHFQLTAR 130

  Fly   129 SSHQRVQVIDLRNYTLELSHKT--IHNETQLNCTV--TNVYPRPT 169
            .::..|:.:...|..:...|.|  .::..::||:.  ::::.|.|
  Fly   131 DANMTVEALPQNNPLISSFHSTYRFNDFVEVNCSTDFSSLFTRIT 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5597NP_611841.1 None
beat-VbNP_731748.1 Ig 24..129 CDD:472250 24/110 (22%)
Ig strand B 41..45 CDD:409353 1/3 (33%)
Ig strand C 56..60 CDD:409353 2/3 (67%)
Ig strand E 91..103 CDD:409353 1/11 (9%)
Ig strand F 113..118 CDD:409353 2/4 (50%)
Ig strand G 126..129 CDD:409353 1/2 (50%)

Return to query results.
Submit another query.