DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and PHOX2B

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_003915.2 Gene:PHOX2B / 8929 HGNCID:9143 Length:314 Species:Homo sapiens


Alignment Length:180 Identity:77/180 - (42%)
Similarity:98/180 - (54%) Gaps:35/180 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 YNLMIDSSYKLC---------ANESAIRGSLNQESSLLFSKITTV-------SEFYPATHNIGSY 90
            |:.:..|:|:.|         |:..|...|.:|.|...::.|.|.       ....|.:.::|:.
Human     6 YSYLNSSAYESCMAGMDTSSLASAYADFSSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTL 70

  Fly    91 NTDFH---------LKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIA 146
            ..  |         .|.:.|.| .|.:|.|||||||||||.||.|||::|.||||||||||||:|
Human    71 RD--HQSSPYAAVPYKLFTDHG-GLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELA 132

  Fly   147 SKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKNPVAGSK 196
            .|:.||||||||||||||||||||||.|       ::.....||..:|.|
Human   133 LKIDLTEARVQVWFQNRRAKFRKQERAA-------AAAAAAAKNGSSGKK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 46/55 (84%)
PHOX2BNP_003915.2 Homeodomain 99..155 CDD:459649 46/55 (84%)
polyalanine repeat 241..260
Blue background indicates that the domain is not in the aligned region.

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