DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and HDG7

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001332093.1 Gene:HDG7 / 835293 AraportID:AT5G52170 Length:687 Species:Arabidopsis thaliana


Alignment Length:139 Identity:43/139 - (30%)
Similarity:66/139 - (47%) Gaps:28/139 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GSYNTDFHLKSYGDD---GLSLTDKS---------------KQRRIRTTF---TSNQLNELEKIF 131
            |.:|..|.|....||   ..||:|.|               |:::.:|.:   ||.|:.|||..|
plant    12 GDFNPSFFLGKLKDDEFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFF 76

  Fly   132 LETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKLDGRKNPVAGS 195
            .|..:|:...|.|:..||.|...:::.||||||.:.:.| |||...|:|.::.||.      ..:
plant    77 KECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQENEKLR------LEN 135

  Fly   196 KYLGPSLKG 204
            .:|..|::|
plant   136 SFLKESMRG 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 21/58 (36%)
HDG7NP_001332093.1 Homeodomain 61..113 CDD:459649 20/51 (39%)
START_ArGLABRA2_like 220..425 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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