DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment PHDP and HAT3

DIOPT Version :9

Sequence 1:	NP_523834.1	Gene:	PHDP / 37788	FlyBaseID:	FBgn0025334	Length:	220	Species:	Drosophila melanogaster
Sequence 2:	NP_191598.1	Gene:	HAT3 / 825210	AraportID:	AT3G60390	Length:	315	Species:	Arabidopsis thaliana

Alignment Length:	163	Identity:	40/163 - (24%)
Similarity:	72/163 - (44%)	Gaps:	29/163 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    48 SSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQ 112
            |..:|.|...|:.|...::           :|...|:.::|..:.|       :||....|.|.:
plant   115 SERELMAAAGAVGGGRVED-----------NEIERASCSLGGGSDD-------EDGSGNGDDSSR 161

  Fly   113 RRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRA--KFRKQERHAI 175
            :::|  .:..|...||:.|.|....:...:..:|.:|:|...:|:||||||||  |.::.|....
plant   162 KKLR--LSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCE 224

  Fly   176 YI------MKDKSSKLDGRKNPVAGSKYLGPSL 202
            |:      :.|::.:|....:.:...| |.|.|
plant   225 YLKRCCENLTDENRRLQKEVSELRALK-LSPHL 256

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
PHDP	NP_523834.1	Homeobox	116..168	CDD:278475	19/53 (36%)
HAT3	NP_191598.1	HD-ZIP_N	19..118	CDD:398351	1/2 (50%)
		Homeobox	165..215	CDD:395001	18/51 (35%)
		HALZ	217..260	CDD:128634	8/41 (20%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000