DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and Rhox7a

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001020257.2 Gene:Rhox7a / 547168 MGIID:3580246 Length:281 Species:Mus musculus


Alignment Length:49 Identity:24/49 - (48%)
Similarity:35/49 - (71%) Gaps:0/49 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAI 175
            :|.:|.||.|||:.|||.:|..:..:||:||:.|.|||||.|.:|:.|:
Mouse     1 METMFQETQYPDVLTREVLARSMDGSEAKVQIRFNNRRAKQRAREKKAM 49

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 21/41 (51%)
Rhox7aNP_001020257.2 Homeodomain <1..42 CDD:459649 21/40 (53%)
homeodomain 202..257 CDD:238039
Blue background indicates that the domain is not in the aligned region.

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