DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and alx4b

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001297007.2 Gene:alx4b / 497424 ZFINID:ZDB-GENE-050208-140 Length:364 Species:Danio rerio


Alignment Length:271 Identity:80/271 - (29%)
Similarity:101/271 - (37%) Gaps:102/271 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CLYTANSEFYNSGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSE 79
            |..|:...:|:..|.|.|.  ....|.|.....|..|........:|....|...        |.
Zfish    10 CDMTSMDSYYSPAAPGQGR--VQQANPYRTFQSSDSKYSPTFLPAKGQTYGEKPR--------SP 64

  Fly    80 FYPATHNI------GSYNTDFHL-------KS---------------YGDDGLSLTD-------- 108
            |:.....:      |:| :.:||       ||               ||.||..|||        
Zfish    65 FHQDCPTLDDSTAEGAY-SKYHLFMQRPACKSPSEDSKLEDGALISCYGKDGTGLTDTDMPQSAD 128

  Fly   109 ---------------------------------------KSKQRRIRTTFTSNQLNELEKIFLET 134
                                                   |.|:||.||||||.||.||||:|.:|
Zfish   129 PTALDGSFISVKDAGLKGQSDRPVSDIGSALDKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKT 193

  Fly   135 HYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKNPVA---GSK 196
            ||||:|.||::|.:..||||||||||||||||:||:||.             |:...|.   .:.
Zfish   194 HYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERF-------------GQMQQVRTHFSTA 245

  Fly   197 YLGPSLKGPQN 207
            |..|.|..|:|
Zfish   246 YELPLLTRPEN 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 40/55 (73%)
alx4bNP_001297007.2 None

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