DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment PHDP and repo

DIOPT Version :9

Sequence 1:	NP_523834.1	Gene:	PHDP / 37788	FlyBaseID:	FBgn0025334	Length:	220	Species:	Drosophila melanogaster
Sequence 2:	NP_477026.1	Gene:	repo / 47285	FlyBaseID:	FBgn0011701	Length:	612	Species:	Drosophila melanogaster

Alignment Length:	189	Identity:	64/189 - (33%)
Similarity:	89/189 - (47%)	Gaps:	48/189 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 GGGLSVANHINHYN--LMIDSSYKLCANESAIRGSLNQESSLL-------------FSKITTVSE 79
            ||.....:|::|.:  |:.||| .:..|..:..|.|.:...:.             .|..|.|:
  Fly   190 GGSPHHLDHLDHGSDGLLQDSS-PVMINGGSAGGKLKKPDEMCSQLEAGGAGVTPPSSSSTVVN- 252

  Fly    80 FYPATHNIGSYNTDFHLKSYG-------------------DDGLSLTDKS-----KQRRIRTTFT 120
              ..|:..|:.|:.   .|.|                   .||.|...|.     |:::.|||||
  Fly   253 --GTTNGTGNANSS---SSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKGDPNGIKKKKTRTTFT 312

  Fly   121 SNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQE--RHAIYI 177
            :.||.|||:.|....|||::.|||:|.||:|:|:||||||||||||:||.|  |...||
  Fly   313 AYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYI 371

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
PHDP	NP_523834.1	Homeobox	116..168	CDD:278475	34/51 (67%)
repo	NP_477026.1	Homeobox	313..360	CDD:278475	29/46 (63%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910