DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHDP and Rhox10

DIOPT Version :9

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001020021.1 Gene:Rhox10 / 434769 MGIID:3580249 Length:196 Species:Mus musculus


Alignment Length:123 Identity:33/123 - (26%)
Similarity:59/123 - (47%) Gaps:26/123 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 HNIG--SYNTDFHLKSYGDDGLSLTDKSKQRRIR---------------TTFTSNQLNELEKIFL 132
            |.:|  .:.|..:.::|..:    |.|..|.|.:               ..:|:.|:.||||.|.
Mouse    47 HELGQDDHPTFKYTQTYSSE----TRKETQARPKEPEKAAGAVSRRSNSKKYTNAQMCELEKAFQ 107

  Fly   133 ETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKN 190
            ||.|||.:.|:.:|..:.:.|.:|:.||:.:|||:|::::..:.     |:...|..|
Mouse   108 ETQYPDAHQRKALAKLIDVDECKVKAWFKYKRAKYRRKQKELLL-----SNATSGTSN 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeobox 116..168 CDD:278475 21/66 (32%)
Rhox10NP_001020021.1 Homeobox 94..143 CDD:278475 21/48 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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