DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHDP and ro

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster


Alignment Length:67 Identity:29/67 - (43%)
Similarity:41/67 - (61%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERH 173
            :.:|||.||||::.|...||..|....|.....|.|:|..|.|||.::::||||||||.::.|:.
  Fly   188 EGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA 252

  Fly   174 AI 175
            .|
  Fly   253 QI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 26/55 (47%)
roNP_524521.1 Homeodomain 196..248 CDD:459649 23/51 (45%)

Return to query results.
Submit another query.