DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and Dfd

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:253 Identity:63/253 - (24%)
Similarity:93/253 - (36%) Gaps:87/253 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TANSEFYNSGANGGGLSVAN----------HINHYNLMIDSSYKLCANESAIRGSLN-QESSLLF 71
            :||..:   |..|||...||          |..| :.|:|...:..:.|.....:|. ||..|..
  Fly   206 SANGYY---GGYGGGYGTANGSVGSTHSQGHSPH-SQMMDLPLQCSSTEPPTNTALGLQELGLKL 266

  Fly    72 SKITTVSEFYPA------------THNIGSYNTDFHLK--------------SYGDDGLSLTDKS 110
            .|  .:.|..||            ..::||.|.|...:              :..||.|..:|..
  Fly   267 EK--RIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSD 329

  Fly   111 KQ-----------------------------------RRIRTTFTSNQLNELEKIFLETHYPDIY 140
            :.                                   :|.||.:|.:|:.||||   |.||....
  Fly   330 EDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEK---EFHYNRYL 391

  Fly   141 TRE---EIASKLHLTEARVQVWFQNRRAKFRKQER--HAIYIMKDKSSKLDGRKNPVA 193
            ||.   |||..|.|:|.::::||||||.|::|..:  :...:.| |:...:|...|||
  Fly   392 TRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRK-KTVDANGNPTPVA 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 27/58 (47%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 27/58 (47%)

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