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Protein Alignment PHDP and Rx
DIOPT Version :9
Sequence 1: | NP_523834.1 |
Gene: | PHDP / 37788 |
FlyBaseID: | FBgn0025334 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_726006.3 |
Gene: | Rx / 37367 |
FlyBaseID: | FBgn0020617 |
Length: | 904 |
Species: | Drosophila melanogaster |
Alignment Length: | 152 |
Identity: | 65/152 - (42%) |
Similarity: | 86/152 - (56%) |
Gaps: | 22/152 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 EFYNSGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLNQ-ESSLLFSKITTVSEFYPATH 85
:|.||| ||.....:|..:|...:...|..|.....|....||| .||....|||:.|:
Fly 489 DFRNSG-NGNPNGNSNSGDHGERLNADSDSLVNGSCASSEDLNQTNSSEQGEKITSGSD------ 546
Fly 86 NIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLH 150
:.|. ||..: |.|.||.|||||:.||:|||:.|.::||||:|:|||:|.|::
Fly 547 DEGQ-----------DDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVN 597
Fly 151 LTEARVQVWFQNRRAKFRKQER 172
|.|.||||||||||||:|:||:
Fly 598 LPEVRVQVWFQNRRAKWRRQEK 619
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PHDP | NP_523834.1 |
Homeobox |
116..168 |
CDD:278475 |
35/51 (69%) |
Rx | NP_726006.3 |
Homeobox |
563..615 |
CDD:278475 |
35/51 (69%) |
OAR |
876..892 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
55 |
1.000 |
Domainoid score |
I4097 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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