Protein Alignment PHDP and lms

DIOPT Version :10

• Sequence 1: NP_523834.1
• Gene: PHDP / 37788
• FlyBaseID: FBgn0025334
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 94
• Identity: 34/94 - (36%)
• Similarity: 53/94 - (56%)
• Gaps: 8/94 - (8%)

  Fly    82 PAT-----HNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYT 141
            |||     .|:....:|..|.|  |||..|.| .:::|.||.|::.|:..||..|....|..:..
  Fly    54 PATSSCLDDNMDDGKSDIDLAS--DDGNGLGD-DRKKRPRTAFSAAQIKALETEFERGKYLSVAK 115

  Fly   142 REEIASKLHLTEARVQVWFQNRRAKFRKQ 170
            |..:|.:|.|||.::::||||||.|::::
  Fly   116 RTALAKQLQLTETQIKIWFQNRRTKWKRK 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PHDP	NP_523834.1	Homeodomain	113..169	CDD:459649	22/55 (40%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	19/54 (35%)
		Homeodomain	87..143	CDD:459649	22/55 (40%)