DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and al

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:82 Identity:51/82 - (62%)
Similarity:59/82 - (71%) Gaps:7/82 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 NTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEAR 155
            |:|.....|       ..|.||||.||||||.||.||||.|..|||||::||||:|.|:.|||||
  Fly    71 NSDCEADEY-------APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128

  Fly   156 VQVWFQNRRAKFRKQER 172
            :||||||||||:||||:
  Fly   129 IQVWFQNRRAKWRKQEK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 41/55 (75%)
alNP_722629.1 Homeodomain 86..142 CDD:459649 41/55 (75%)
OAR 374..391 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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