DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and CG11294

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:104 Identity:51/104 - (49%)
Similarity:72/104 - (69%) Gaps:9/104 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERH 173
            :.:|||.|||||..||.|||.:|.:|||||::.|||:|.::.|:||||||||||||||:|||.| 
  Fly    21 RRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQAR- 84

  Fly   174 AIYIMKD--KSSKLDGRKNPVAGSKYLGPSLKGPQNGHG 210
             :.:::|  :...|.....||.|    |.:::| .:|:|
  Fly    85 -LQLLQDAWRMRCLSLGTPPVMG----GGAVQG-GSGNG 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 37/55 (67%)
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 34/51 (67%)

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