Protein Alignment PHDP and Gsc

DIOPT Version :10

• Sequence 1: NP_523834.1
• Gene: PHDP / 37788
• FlyBaseID: FBgn0025334
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001178802.1
• Gene: Gsc / 317715
• RGDID: 631425
• Length: 256
• Species: Rattus norvegicus
• Alignment Length: 119
• Identity: 46/119 - (38%)
• Similarity: 70/119 - (58%)
• Gaps: 16/119 - (13%)

  Fly    82 PATH------NIGSYN-TDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDI 139
            |..|      |:|:.: |:..|       |:.....::||.||.||..||..||.:|.||.|||:
  Rat   130 PVPHQMLPYMNVGTLSRTELQL-------LNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDV 187

  Fly   140 YTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMK--DKSSKLDGRKNP 191
            .|||::|.|:||.|.:|:|||:|||||:|:|:|.:....:  :|.:|...:.:|
  Rat   188 GTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSSSEESENAEKWNKTSSKASP 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PHDP	NP_523834.1	Homeodomain	113..169	CDD:459649	33/55 (60%)
Gsc	NP_001178802.1	Homeodomain	161..217	CDD:459649	33/55 (60%)