DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and otx2a

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_073764513.1 Gene:otx2a / 30462 ZFINID:ZDB-GENE-980526-27 Length:364 Species:Danio rerio


Alignment Length:136 Identity:55/136 - (40%)
Similarity:76/136 - (55%) Gaps:33/136 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 HLKS--YGDDGLSL---------------TDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTR 142
            :||.  |..:||.|               |:..||||.|||||..||:.||.:|.:|.||||:.|
Zfish    30 YLKQAPYAMNGLGLGGATMDLLHPSVGYPTNPRKQRRERTTFTRTQLDILESLFAKTRYPDIFMR 94

  Fly   143 EEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKL-DGRKNPVAGSKYLGPSLKGP- 205
            ||:|.|::|.|:||||||:|||||.|:|::.:     ..:||: ..:|.|       .||.:.| 
Zfish    95 EEVALKINLPESRVQVWFKNRRAKCRQQQQQS-----STNSKIRPAKKKP-------SPSRESPG 147

  Fly   206 --QNGH 209
              .:||
Zfish   148 SESSGH 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 35/55 (64%)
otx2aXP_073764513.1 None

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