DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and pitx2

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:148 Identity:55/148 - (37%)
Similarity:76/148 - (51%) Gaps:24/148 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSY 90
            :|:....||:|:.:......:||.::|                    .:.|||:    |.:..|.
Zfish    20 TGSKHAPLSMASSLQPLQRSVDSKHRL--------------------DVHTVSD----TSSPESV 60

  Fly    91 NTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEAR 155
            ..:.......|.....:.|.:|||.||.|||.||.|||..|....|||:.||||||...:|||||
Zfish    61 EKEKGQSKNEDSNDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEAR 125

  Fly   156 VQVWFQNRRAKFRKQERH 173
            |:|||:|||||:||:||:
Zfish   126 VRVWFKNRRAKWRKRERN 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 36/55 (65%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 22/96 (23%)
Homeodomain 83..139 CDD:459649 36/55 (65%)
OAR 272..289 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289
Nuclear localization signal. /evidence=ECO:0000255 282..286
Blue background indicates that the domain is not in the aligned region.

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