DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and Rhox11

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001020044.1 Gene:Rhox11 / 298346 RGDID:1564332 Length:215 Species:Rattus norvegicus


Alignment Length:63 Identity:28/63 - (44%)
Similarity:42/63 - (66%) Gaps:3/63 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDK 181
            ||..||.|::.:|.||.|||.:.|:|:|..:::.|.:|:.||.|:|||.||.:|.   |:|.|
  Rat   103 FTPGQLWEMQAVFEETQYPDAFRRKELAELMNVDEQKVKDWFNNKRAKLRKIQRE---ILKGK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 22/49 (45%)
Rhox11NP_001020044.1 COG5576 <76..185 CDD:227863 28/63 (44%)
Homeodomain 103..153 CDD:459649 22/49 (45%)

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