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Protein Alignment PHDP and Alx4
DIOPT Version :9
Sequence 1: | NP_523834.1 |
Gene: | PHDP / 37788 |
FlyBaseID: | FBgn0025334 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100023.1 |
Gene: | Alx4 / 296511 |
RGDID: | 1310201 |
Length: | 399 |
Species: | Rattus norvegicus |
Alignment Length: | 147 |
Identity: | 64/147 - (43%) |
Similarity: | 80/147 - (54%) |
Gaps: | 27/147 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 DSSYKLCANESAIRGSLN-----QESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDG--- 103
|.|.||.........:|. :||:| ...|..|.:..:|..|:...:|..|..|
Rat 122 DGSLKLQEGSGGHNAALQVPCYAKESNL------GEPELPPDSEPVGMDNSYLSVKETGAKGPQD 180
Fly 104 ---------LSLTD----KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEAR 155
|..|| |.|:||.||||||.||.||||:|.:|||||:|.||::|.:..|||||
Rat 181 RAGAEIPSPLEKTDSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEAR 245
Fly 156 VQVWFQNRRAKFRKQER 172
|||||||||||:||:||
Rat 246 VQVWFQNRRAKWRKRER 262
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PHDP | NP_523834.1 |
Homeobox |
116..168 |
CDD:278475 |
38/51 (75%) |
Alx4 | NP_001100023.1 |
Homeobox |
206..258 |
CDD:278475 |
38/51 (75%) |
OAR |
375..392 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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