DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and ind

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_996087.2 Gene:ind / 2768974 FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster


Alignment Length:82 Identity:37/82 - (45%)
Similarity:49/82 - (59%) Gaps:10/82 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LKSYGDDG-LSLT-------DKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLT 152
            ||::...| :.:|       |.||  ||||.|||.||.|||:.|....|.....|.|||::|.|:
  Fly   205 LKNHSSGGPVEITPLINDYADSSK--RIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLS 267

  Fly   153 EARVQVWFQNRRAKFRK 169
            |.:|::||||||.|.:|
  Fly   268 EKQVKIWFQNRRVKQKK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 29/55 (53%)
indNP_996087.2 Homeodomain 228..284 CDD:459649 30/57 (53%)

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