DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and dsc-1

DIOPT Version :9

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_510497.1 Gene:dsc-1 / 181599 WormBaseID:WBGene00001096 Length:310 Species:Caenorhabditis elegans


Alignment Length:239 Identity:62/239 - (25%)
Similarity:90/239 - (37%) Gaps:82/239 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SEFYNSGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATH 85
            :.:|::      |.||.| ||:.:.                  ||.....|...||||....| |
 Worm    71 ASYYHN------LGVALH-NHFQMS------------------NQHYLSDFDCPTTVSPISSA-H 109

  Fly    86 NIGSY----------NTDFHLKS---YGDD---------------------------GLSLTDKS 110
            ..|..          |.|.|:.|   ||:.                           .|..:|.:
 Worm   110 ETGQLPQLSPYDHIGNQDPHMFSPHAYGNSMIPDNSYFENASRSISAPNVGNSTLNPSLMSSDNA 174

  Fly   111 K----QRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQE 171
            :    :||.||.||..|...||..|.|:||||...::.:|..|.:.|.|:.|||||||||:|::|
 Worm   175 QSCGGRRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITVWFQNRRAKWRRKE 239

  Fly   172 RHAIYIMKD--KSSKLDGRKNPVAGSKYL------GPSLKGPQN 207
            ..    .:|  ::....|..|....:.:.      ||:.|.|.:
 Worm   240 HR----QRDRTRNESFSGGSNSFDFACFSAQHPDDGPNAKHPNS 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeobox 116..168 CDD:278475 26/51 (51%)
dsc-1NP_510497.1 Homeobox 184..236 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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