DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and ceh-37

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001360629.1 Gene:ceh-37 / 181530 WormBaseID:WBGene00000458 Length:292 Species:Caenorhabditis elegans


Alignment Length:107 Identity:45/107 - (42%)
Similarity:64/107 - (59%) Gaps:7/107 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAI 175
            |.||.|||::..||..||.:|.||.|||::.||.:|.::.|.|:|:||||:|||||:|.||:...
 Worm    54 KNRRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEKQKP 118

  Fly   176 YIMKDKSSK---LDGRKNPVAGSKYLGPSLKGPQNGHGRQMK 214
            ....:||.:   .|.::..|..    |..|||...|:..|:|
 Worm   119 KRSNEKSQEHKSEDQQQTDVLD----GEPLKGGSPGYQPQIK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 30/55 (55%)
ceh-37NP_001360629.1 Homeodomain 56..111 CDD:459649 30/54 (56%)

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