DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and ttx-1

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001024212.1 Gene:ttx-1 / 180313 WormBaseID:WBGene00006652 Length:391 Species:Caenorhabditis elegans


Alignment Length:329 Identity:76/329 - (23%)
Similarity:119/329 - (36%) Gaps:106/329 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 VLVSLIHQVNGAWTLPNF-----ACDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKN 146
            ::|.||..|..|.:.||.     ..|  |::|:|  |....|.|...:.:.:..||..:..|:..
 Worm   313 IMVELIIDVLRALSSPNLDIRRKTLD--ISLDLI--THHNINEVVQMLKKEVVKTQSGELEKNGE 373

  Fly   147 SRRVCLTILLVWAISAA------IGSPIV------LGLNNTQDRSPDLCVFYNTDF--------- 190
            .|:     :|:.||.|.      :.|.:|      ||.:|... :.|:.||.....         
 Worm   374 YRQ-----MLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVAS-ALDVVVFVREIIETNPKLRVS 432

  Fly   191 IVYSSLTSFY-------IPCIIMVFLYWNIFKALRTRAKKQRAARKPHLSEITAGGSIIENIAQT 248
            |:...|.:||       .||.:     |.|.:...:            |||:.:|.|.|     |
 Worm   433 IITRLLDTFYQIRAGKVCPCAL-----WIIGEYCLS------------LSEVESGISTI-----T 475

  Fly   249 KRLAE------TQLDGSTRSGSKILPDEERPTNTASGSNEEDDENAGSPDIDDCHVIVND----- 302
            :.|.|      ::....|.:..||     :||::|..|:.:.             ||:.|     
 Worm   476 QCLGELPFYSVSEESEPTETSKKI-----QPTSSAMVSSRKP-------------VILADGTYAT 522

  Fly   303 ----KSTEFMLATVVEEAGNVT---LKPLSLVR---CGVQQALTLNRNDSTLSTNSRDSSRKDKK 357
                ..|.|...|||:  |::|   |:.|.|..   .|...|.||.:....|.......:..:|.
 Worm   523 QSAASETTFSSPTVVQ--GSLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKT 585

  Fly   358 NTQA 361
            .|||
 Worm   586 VTQA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 14/61 (23%)
ttx-1NP_001024212.1 Homeodomain 200..256 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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