DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and ceh-17

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_491393.1 Gene:ceh-17 / 172059 WormBaseID:WBGene00000440 Length:237 Species:Caenorhabditis elegans


Alignment Length:171 Identity:75/171 - (43%)
Similarity:103/171 - (60%) Gaps:16/171 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LYTANSEFYNSGANGGGLSVANHINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKI-----T 75
            |.||::.  :|.:.|...|.::..::|......|.:...| :.::..|.|:|.|:.|..     :
 Worm    57 LTTAHNT--SSSSAGNSTSSSSSSSNYRNTTHDSLQAFFN-TGLQYQLYQKSQLIGSDTIQRTSS 118

  Fly    76 TVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIY 140
            .|....|.:..:|:      |.|.|...|:..::.|||||||||||.||.|||:.|.||||||||
 Worm   119 NVLNGLPRSSLVGA------LCSTGGAPLNPAERRKQRRIRTTFTSGQLKELERSFCETHYPDIY 177

  Fly   141 TREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDK 181
            ||||||.::.||||||||||||||||:||||:  |..:||:
 Worm   178 TREEIAMRIDLTEARVQVWFQNRRAKYRKQEK--IRRVKDE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 45/55 (82%)
ceh-17NP_491393.1 DLL_N 19..112 CDD:463567 14/57 (25%)
Homeodomain 150..206 CDD:459649 45/55 (82%)

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