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Protein Alignment PHDP and Vsx2
DIOPT Version :9
Sequence 1: | NP_523834.1 |
Gene: | PHDP / 37788 |
FlyBaseID: | FBgn0025334 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017449515.1 |
Gene: | Vsx2 / 171360 |
RGDID: | 621215 |
Length: | 380 |
Species: | Rattus norvegicus |
Alignment Length: | 105 |
Identity: | 52/105 - (49%) |
Similarity: | 63/105 - (60%) |
Gaps: | 22/105 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 LSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
|:.|.|.|:||.||.|||.||.||||.|.|.||||:|.||.:|.|..|.|.|:||||||||||:|
Rat 140 LNQTKKRKKRRHRTIFTSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR 204
Fly 169 KQE-------------------RHAIYIMKD--KSSKLDG 187
|:| ||:|.:.:. ||:| ||
Rat 205 KREKCWGRSSVMAEYGLYGAMVRHSIPLPESILKSAK-DG 243
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PHDP | NP_523834.1 |
Homeobox |
116..168 |
CDD:278475 |
35/51 (69%) |
Vsx2 | XP_017449515.1 |
Homeobox |
153..205 |
CDD:395001 |
34/51 (67%) |
OAR |
319..337 |
CDD:397759 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0494 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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