DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and LOC1280259

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_061515440.1 Gene:LOC1280259 / 1280259 VectorBaseID:AGAMI1_004826 Length:650 Species:Anopheles gambiae


Alignment Length:120 Identity:57/120 - (47%)
Similarity:71/120 - (59%) Gaps:9/120 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRR 164
            |...||....:||||.||.||..||||||::|.||||||.:.|||::.:|.|:||||||||||||
Mosquito   408 GHGPLSALSNNKQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRR 472

  Fly   165 AKFRKQER--HAIYIMKDKSSKLDGRKNPVAGSKYLG-PSLKG------PQNGHG 210
            ||.||.|.  |...|:...|..:.....|...:.|:. |||:.      |.:|.|
Mosquito   473 AKCRKHENQMHKGIILSSHSPPVTTPLEPCRIAPYVNVPSLRAGTGGVPPGSGTG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 38/55 (69%)
LOC1280259XP_061515440.1 None

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