DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and LOC1278279

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_061514181.1 Gene:LOC1278279 / 1278279 VectorBaseID:AGAMI1_005629 Length:664 Species:Anopheles gambiae


Alignment Length:169 Identity:60/169 - (35%)
Similarity:84/169 - (49%) Gaps:46/169 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 PATHNIGSYNTDFH-----------LKSYGDDGLSLT-DKSKQRRIRTTFTSNQLNELEKIFLET 134
            |.|  |||..:..|           :...|:|..||. |:.|.||.||||:..||.||||.|.::
Mosquito   244 PGT--IGSPGSGSHETLGSPDGNRLIDIEGEDSNSLDGDQPKFRRNRTTFSPEQLEELEKEFDKS 306

  Fly   135 HYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSS---------------- 183
            |||.:.|||.:||:..|:||||||||.|||||:|:.:|  :.::|..:|                
Mosquito   307 HYPCVSTRERLASRTSLSEARVQVWFSNRRAKWRRHQR--MNLLKRSTSPTTRAAAAAGTASSAF 369

  Fly   184 -----------KLDGRKNPVAGSKYLG--PSLK-GPQNG 208
                       :...::.|.|||:..|  ||.: .|.:|
Mosquito   370 TPGSPPPPPPPQQQQQQPPTAGSQPPGTSPSAQLAPSSG 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 35/55 (64%)
LOC1278279XP_061514181.1 None

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