DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and LOC1273474

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_061506563.1 Gene:LOC1273474 / 1273474 VectorBaseID:AGAMI1_003345 Length:364 Species:Anopheles gambiae


Alignment Length:224 Identity:73/224 - (32%)
Similarity:97/224 - (43%) Gaps:68/224 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GANG---------------------GGLS---VANHINHYNLMIDSSYKLCANESAIRGSLNQES 67
            ||||                     ||||   :::|.:|:........:|..|     ||:..|.
Mosquito    81 GANGDKSLGQHRKCSSTPEDFSALYGGLSGTPISDHHHHHTPAHTPPNRLSDN-----GSVTAEG 140

  Fly    68 SLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDD--------GLSLTDKS----KQRRIRTTFT 120
            :  |.|:..    .|.:..:|| :....:.|.|..        |.:.|..|    .:||.|||||
Mosquito   141 A--FKKLKP----EPNSGPLGS-SVPGGISSPGSGISGLPQHAGHTPTTASCPTPARRRHRTTFT 198

  Fly   121 SNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKL 185
            ..||.|||..|.::||||||.|||:|....|.|||:||||||||||:||||:..           
Mosquito   199 QEQLAELEAAFAKSHYPDIYCREELARTTKLNEARIQVWFQNRRAKYRKQEKQL----------- 252

  Fly   186 DGRKNPVAGSKYLGPSLKGPQNGHGRQMK 214
                     .|.|.||:....||..|.::
Mosquito   253 ---------QKALAPSVIPSCNGMMRNIQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 37/55 (67%)
LOC1273474XP_061506563.1 None

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