DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHDP and Phox2a

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_032913.1 Gene:Phox2a / 11859 MGIID:106633 Length:280 Species:Mus musculus


Alignment Length:177 Identity:73/177 - (41%)
Similarity:95/177 - (53%) Gaps:28/177 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEFSLLNKANFDKDCLYTANSEFYNS-GA--NGGGLSVANHINHYNLMIDSSYKLCANESAIRGS 62
            |::|.||  ::| .|:....:..|.. ||  ..||...:        .:..::..........||
Mouse     1 MDYSYLN--SYD-SCVAAMEASAYGDFGACSQPGGFQYS--------PLRPAFPAAGPPCPALGS 54

  Fly    63 LNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNEL 127
            .|       ..:..:.:..||.::...|       .:..:...|.:|.|||||||||||.||.||
Mouse    55 SN-------CALGALRDHQPAPYSAVPY-------KFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105

  Fly   128 EKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQERHA 174
            |::|.||||||||||||:|.|:.||||||||||||||||||||||.|
Mouse   106 ERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAA 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 46/55 (84%)
Phox2aNP_032913.1 Homeodomain 91..147 CDD:459649 46/55 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..244 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..280
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.