DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and LOC116406456

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_002935721.1 Gene:LOC116406456 / 116406456 XenbaseID:XB-GENE-29091431 Length:338 Species:Xenopus tropicalis


Alignment Length:124 Identity:39/124 - (31%)
Similarity:62/124 - (50%) Gaps:7/124 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SYKLCANESAIRGSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQR 113
            |.|:.:.||....:.:||.....::::..|.      .:....|...:||.......||.||.::
 Frog   208 SGKVPSGESPDPKAAHQEDRSCLAEVSVSSP------EVQDKETKEEIKSDTPTSNWLTAKSGRK 266

  Fly   114 RIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQER 172
            : |..:|.:|..||||.||...|.....|.||:..::||:.:|::||||||.|.:|..|
 Frog   267 K-RCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSR 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 23/55 (42%)
LOC116406456XP_002935721.1 Homeodomain 265..321 CDD:459649 23/56 (41%)

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