DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and Rax

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_446130.1 Gene:Rax / 114213 RGDID:620371 Length:342 Species:Rattus norvegicus


Alignment Length:116 Identity:60/116 - (51%)
Similarity:77/116 - (66%) Gaps:9/116 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GDDGLSLTD---KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQ 161
            ||..||..:   |.|.||.|||||:.||:|||:.|.::||||:|:|||:|.|::|.|.|||||||
  Rat   122 GDSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQ 186

  Fly   162 NRRAKFRKQERHAIYIMKDKSSKL--DGRKNPVAGSKYLGPSLKGPQNGHG 210
            |||||:|:||:..:..||.:.|.|  ..|..|   |..|.| |.||.:|.|
  Rat   187 NRRAKWRRQEKLEVSSMKLQDSPLLSFSRSPP---SSALAP-LGGPGSGSG 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 37/55 (67%)
RaxNP_446130.1 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..141 8/18 (44%)
Homeodomain 138..194 CDD:459649 37/55 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..295 11/29 (38%)
OAR 316..331 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 319..332
Nuclear localization signal. /evidence=ECO:0000255 325..329
Blue background indicates that the domain is not in the aligned region.

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