DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and prop1

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_004914810.1 Gene:prop1 / 101734397 XenbaseID:XB-GENE-22068967 Length:242 Species:Xenopus tropicalis


Alignment Length:191 Identity:65/191 - (34%)
Similarity:88/191 - (46%) Gaps:52/191 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IRGSLNQESSL----LFSKITTVSEFYPATHNI-GSYNTDFHLKSYGDDGLSLTDK--------S 110
            :|...:::.||    ::|:|.||:    :|.:| .||.|...:.|...:||..|.:        .
 Frog     4 VRLKASKKKSLEYHEVYSEIATVT----STADIDSSYKTFPDVSSAEANGLLSTSRHMPPHYPTP 64

  Fly   111 KQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQER--- 172
            .:||.||||:..||..||..|.:.||||||.|||:|....|.|||:||||||||||.||.||   
 Frog    65 TRRRHRTTFSQEQLEHLETAFSKNHYPDIYCREELAKITKLNEARIQVWFQNRRAKHRKHERTTQ 129

  Fly   173 -------------------------------HAI-YIMKDKSSKLDGRKNPVAGSKYLGPS 201
                                           ||: :|.:..|....|...|.|.|::..||
 Frog   130 KSTVPSSMLTCGSLMSGMCSMSPPSRQYQYPHALNHIPRFSSMSSAGYHPPSAVSQFTCPS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 35/55 (64%)
prop1XP_004914810.1 Homeodomain 73..123 CDD:459649 30/49 (61%)

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