DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and duxa

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_002941810.1 Gene:duxa / 100496651 XenbaseID:XB-GENE-22065713 Length:255 Species:Xenopus tropicalis


Alignment Length:96 Identity:33/96 - (34%)
Similarity:48/96 - (50%) Gaps:18/96 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 THNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASK 148
            |...||:|     :.:|          |.||.||.::...|:.|...|.:..||.|..||.::..
 Frog    13 TQERGSFN-----RLHG----------KTRRRRTVYSQTHLDLLLSTFNKDPYPGITVRERLSQI 62

  Fly   149 LHLTEARVQVWFQNRRAKFRK---QERHAIY 176
            ..:.|:|:|||||||||:..|   |||..::
 Frog    63 TGIHESRIQVWFQNRRARKNKKSVQERENVH 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 23/55 (42%)
duxaXP_002941810.1 homeodomain 27..85 CDD:238039 24/57 (42%)

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