DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and dmbx1

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_017949066.1 Gene:dmbx1 / 100493907 XenbaseID:XB-GENE-486746 Length:367 Species:Xenopus tropicalis


Alignment Length:158 Identity:58/158 - (36%)
Similarity:86/158 - (54%) Gaps:23/158 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 INHYNLMIDSSYKLCA-NESAIRGSLNQESSLLFSKITTVSEFYPATHNI-------GSYNTDFH 95
            :.||.:   :.|.|.| |..:...:|:|:::   .:.....::.|:.|.:       |....|..
 Frog     1 MQHYGV---NGYSLHAMNSLSAMYNLHQQAA---QQAQHAPDYRPSVHALTLAERLAGCTFQDII 59

  Fly    96 LKS-YGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVW 159
            |:: ||      :...||||.||.||:.||..|||.|.:|||||:..||.:|...:|.|||||||
 Frog    60 LEARYG------SQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVW 118

  Fly   160 FQNRRAKFRKQER--HAIYIMKDKSSKL 185
            |:||||||||::|  ....:.|.|.|::
 Frog   119 FKNRRAKFRKKQRSLQKEQLQKQKDSEV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 35/55 (64%)
dmbx1XP_017949066.1 Homeodomain 72..128 CDD:459649 35/55 (64%)

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