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Protein Alignment PHDP and drgx
DIOPT Version :9
Sequence 1: | NP_523834.1 |
Gene: | PHDP / 37788 |
FlyBaseID: | FBgn0025334 |
Length: | 220 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_004915967.1 |
Gene: | drgx / 100493837 |
XenbaseID: | XB-GENE-993712 |
Length: | 263 |
Species: | Xenopus tropicalis |
Alignment Length: | 145 |
Identity: | 65/145 - (44%) |
Similarity: | 85/145 - (58%) |
Gaps: | 15/145 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 FY---PATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYT 141
|| |....:||.....|..|..|||.. :.||||.|||||..||..||.:|.:|||||::|
Frog 2 FYFHCPPQLEVGSPPFGAHAASEFDDGFL---RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT 63
Fly 142 REEIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKNPVAGSKYLGPS----- 201
|||:|.|::||||||||||||||||:||.||.: .:.:.:|....:...|| :.|.||
Frog 64 REELAMKINLTEARVQVWFQNRRAKWRKTERGS---CEQEGAKESAPEVTTAG-RNLSPSSTVEP 124
Fly 202 LKGPQNGHGRQMKCL 216
::|.:.....|.:||
Frog 125 VRGKKETLEAQQRCL 139
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PHDP | NP_523834.1 |
Homeobox |
116..168 |
CDD:278475 |
37/51 (73%) |
drgx | XP_004915967.1 |
Homeobox |
38..91 |
CDD:395001 |
37/52 (71%) |
OAR |
204..220 |
CDD:397759 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3133 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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