DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHDP and alx4a

DIOPT Version :10

Sequence 1:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_001340966.1 Gene:alx4a / 100006399 ZFINID:ZDB-GENE-070712-3 Length:368 Species:Danio rerio


Alignment Length:197 Identity:74/197 - (37%)
Similarity:98/197 - (49%) Gaps:55/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NSGANGG----------GLSVAN-HINHYNLMIDSSYKLCANESAIRGSLNQESSLLFSKITTVS 78
            |||.|||          ||:.:. ..|.....:|.|| |...:|.:: |..|.:|.|.|.:.   
Zfish   105 NSGHNGGLIACYGKDSTGLTDSELPQNSDPAGMDGSY-LSVKDSGVK-SPQQATSELASPLD--- 164

  Fly    79 EFYPATHNIGSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTRE 143
                              |:.|:     ::|.|:||.||||||.||.||||:|.:|||||:|.||
Zfish   165 ------------------KTEGE-----SNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 206

  Fly   144 EIASKLHLTEARVQVWFQNRRAKFRKQERHAIYIMKDKSSKLDGRKNPVA---GSKYLGPSLKGP 205
            ::|.:..||||||||||||||||:||:||.             |:...|.   .:.|..|.|..|
Zfish   207 QLALRTDLTEARVQVWFQNRRAKWRKRERF-------------GQMQQVRTHFSTAYELPLLTRP 258

  Fly   206 QN 207
            :|
Zfish   259 EN 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 40/55 (73%)
alx4aXP_001340966.1 Homeodomain 176..232 CDD:459649 40/55 (73%)
OAR 344..362 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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