DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4882 and mrps-27

DIOPT Version :9

Sequence 1:NP_001286791.1 Gene:CG4882 / 37787 FlyBaseID:FBgn0025336 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_493580.1 Gene:mrps-27 / 173349 WormBaseID:WBGene00010766 Length:424 Species:Caenorhabditis elegans


Alignment Length:376 Identity:93/376 - (24%)
Similarity:168/376 - (44%) Gaps:47/376 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KFAAGSSHAVTSVDLDVFV-NPDNRPMDLVDRLLKLRKQKEASLVPLIPSVLVKQLLDSTNPQET 96
            ||..|...:...||..|.| ...::..|:::.|.|||...:|:.........:.:||....|:..
 Worm    60 KFIGGGYASAVDVDAAVCVAEQKDQVDDVIELLYKLRHSVKAAEKLESSEYAIVRLLLKYQPETI 124

  Fly    97 ISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLATILVDRNLCNNELLESLALQSFWSFA 161
            |::..:||.||:|::|...|.::|..|...:...:|::.|.::.:...:||||..|.|   :..|
 Worm   125 ITLANDPINYGVFLNQHLACIVIDHFLKTSNIQAAARIVTWMIQQEELDNELLNILGL---YVCA 186

  Fly   162 KEFK-PFESSQVQPPAKNVEVEKVRVKFIRNYP------DDASENTE----EKKLGRAMVRLGSG 215
            |..: |.|...:.....:.|.|.:....||.:.      |...|:.:    ...:|:::..|...
 Worm   187 KWVELPVEQQTLDLGGADDEEEDINDDDIRTFKFPYLKNDSFDEHFDLSNPHHLIGKSLQWLSRD 251

  Fly   216 EGSL-KELKQNVALLGYVLTGQVPEASSFLASNSAALHKETLLAAQSIVESLKLEGSEE------ 273
            ...: .:||.::..||.||..::.||:|.:::        .:...:|||.. ||.|.||      
 Worm   252 TKFIDSQLKSSLNALGAVLFEKLAEANSTIST--------AIPCVKSIVAG-KLAGKEEEAGVKN 307

  Fly   274 LLKSLQEAVEKSSKSNAIQSLLENSVKANVQKFEPKLLADYGESYQEWAKKFEAAVQRQLDSQSV 338
            :|:|:.|..|...|.:.|  :||:..|..|.: |..|.|...:.:.||.::.:|..:.|.....:
 Worm   308 ILESIGEVEEAKEKLSDI--ILEHLKKIQVSE-EDSLCAVQTKLFGEWNERRQALAKSQAQKVLL 369

  Fly   339 EERKATIQKTLSELEAKRQNLWFFENR-------------DDIDIQIYKKK 376
            ..|:..|:..|.:|:.:.:.:.||:||             |:...|.:|||
 Worm   370 RLRQDEIRGELKQLDEQEEQMSFFKNRLIWEKRAAENTQIDEESKQRHKKK 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4882NP_001286791.1 MRP-S27 1..350 CDD:287055 82/335 (24%)
mrps-27NP_493580.1 MRP-S27 1..381 CDD:370790 82/335 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159014
Domainoid 1 1.000 70 1.000 Domainoid score I6275
eggNOG 1 0.900 - - E1_KOG4570
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H50578
Inparanoid 1 1.050 82 1.000 Inparanoid score I3777
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29011
OrthoDB 1 1.010 - - D344346at33208
OrthoFinder 1 1.000 - - FOG0007077
OrthoInspector 1 1.000 - - oto17958
orthoMCL 1 0.900 - - OOG6_113979
Panther 1 1.100 - - LDO PTHR21393
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3141
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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