DRSC/TRiP Functional Genomics Resources

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Protein Alignment ken and bcl11a

DIOPT Version :10

Sequence 1:NP_523833.1 Gene:ken / 37785 FlyBaseID:FBgn0011236 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001072657.1 Gene:bcl11a / 780114 XenbaseID:XB-GENE-486641 Length:797 Species:Xenopus tropicalis


Alignment Length:522 Identity:111/522 - (21%)
Similarity:169/522 - (32%) Gaps:137/522 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 TTDSAYLSSKCGGLRDRADRRKQQY------TSPQNLEPDQTLKY-------------EVDSVDE 168
            |.:..|..:.|.....:|.:.|:..      :||..::.|..|..             ...||.:
 Frog   367 TGEKPYKCNLCDHACTQASKLKRHMKTHIHKSSPMTVKSDDGLSTASSPEPGTSDLLGSASSVLK 431

  Fly   169 SRNAADFSSAFNSN----DNCESAAECERSGGHNNKEEDEDDCTHKDNKSDKDTDEIVNLSNAPP 229
            | ..|.|.|..:||    :..|...|.|.......:||:|:|.|..|::.|              
 Frog   432 S-VVAKFKSENDSNLIPENGDEEEEEEEEEEEEEEEEEEEEDLTETDSRPD-------------- 481

  Fly   230 SGTSGSNSNISTSSNHQQQQHHHHHHHNHNNNNNNNNNNSSSSTINPVNLSLDLRTKSENSASRT 294
                     .|...|.:..:||              .||:.|           :..:|.....::
 Frog   482 ---------YSFGLNLEAARHH--------------ENNARS-----------IEERSMPEVMQS 512

  Fly   295 LGSGSDHSGIDLAVTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPENYV--------VTPHRK 351
            :|.|..|..........|..||..|   |..:|.:...|...:....:...        .:|...
 Frog   513 MGLGMHHFSDAFHQVLMEKHKRGHL---SEPEVQRDTCDEDSVAGESDRIESGTVNGRGCSPGES 574

  Fly   352 RRPGFHNTQSDNQPFTSYPHSLLEELRLAKSTTSPISGFGSEKNMLAHLEDGALNGDTLTPDRKH 416
            ...|.........|.:..|.|  :.::|.|....|.|...:.:|:.:....|             
 Frog   575 ASGGLSKKLLLGSPSSLSPFS--KRIKLEKEFDLPASAMPNTENVYSQWLAG------------- 624

  Fly   417 LLEAQRNRAQSPEIPMHLGPQFVYQWQSNQNAAMSAMPNLQSRLSSLSHISLNLDHPEGR-SGSA 480
              .|...:.:.|         |:....|.|:      |...|...|..:.||....|.|. .|..
 Frog   625 --YAASRQLKEP---------FLTFGDSRQS------PFASSSEHSSENGSLRFSTPPGEMDGGI 672

  Fly   481 SG-SGANLAGSNTHAS-----------SVREYRCEYCGKQFGMSWNLKTHLRVHTGEKPFACRLC 533
            || ||....||..|.|           ..|...||||||.|....||..|.|.||||:|:.|.||
 Frog   673 SGRSGTGSGGSTPHISGPGPGRPSSKEGKRSDTCEYCGKIFKNCSNLTVHRRSHTGERPYKCELC 737

  Fly   534 VAMFKQKAHLLKHLCSVHRNVITTTNGADTENRYSCCFCSMCFESVQELVRHLSGHHNNLLLTKN 598
            .....|.:.|.:|:         .|:|...::.|.|..|.|.|.....|.:|:...|::.:|..:
 Frog   738 NYACAQSSKLTRHM---------KTHGQVGKDVYKCEICQMPFSVYSTLEKHMKKWHSDRVLNND 793

  Fly   599 LR 600
            ::
 Frog   794 IK 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kenNP_523833.1 BTB_POZ_BAB-like 32..117 CDD:349624
zf-C2H2 500..522 CDD:395048 11/21 (52%)
C2H2 Zn finger 502..522 CDD:275368 11/19 (58%)
zf-H2C2_2 514..539 CDD:463886 12/24 (50%)
C2H2 Zn finger 530..551 CDD:275368 6/20 (30%)
C2H2 Zn finger 569..589 CDD:275368 6/19 (32%)
bcl11aNP_001072657.1 zf-C2H2 345..366 CDD:395048
C2H2 Zn finger 346..366 CDD:275368
zf-H2C2_2 358..383 CDD:463886 3/15 (20%)
C2H2 Zn finger 374..394 CDD:275368 3/19 (16%)
zf-C2H2 705..726 CDD:395048 11/20 (55%)
C2H2 Zn finger 706..726 CDD:275368 11/19 (58%)
zf-H2C2_2 718..743 CDD:463886 12/24 (50%)
C2H2 Zn finger 734..754 CDD:275368 6/28 (21%)
C2H2 Zn finger 764..782 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

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